BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005G12SP1|AL425430
(971 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig277 1764 0.0
>3x_Contig277
Length = 1204
Score = 1764 bits (887), Expect = 0.0
Identities = 904/913 (99%)
Strand = Plus / Plus
Query: 1 gtacttaaaacataatcacgngatcgaaaataccaccagatttctctttctgtacgaaat 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 292 gtacttaaaacataatcacgtgatcgaaaataccaccagatttctctttctgtacgaaat 351
Query: 61 cgttactttgtatcgaaaatktttttgaattgtaagaatgccaaattcgaaatcagtttc 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 352 cgttactttgtatcgaaaatttttttgaattgtaagaatgccaaattcgaaatcagtttc 411
Query: 121 aacagaattgagtagatatatgtggatatgattaakctcgatgagtaatgaaggtgtaaa 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 412 aacagaattgagtagatatatgtggatatgattaatctcgatgagtaatgaaggtgtaaa 471
Query: 181 ggtataaagatcttgttagcaaccgagtttaattccagagaatagaacggccaggtgcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ggtataaagatcttgttagcaaccgagtttaattccagagaatagaacggccaggtgcag 531
Query: 241 tatttgggaaagtatcaaaaaggatatctagtgatagttttttctgattgtttataatac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 tatttgggaaagtatcaaaaaggatatctagtgatagttttttctgattgtttataatac 591
Query: 301 ctaaagttcaggatgtctgatttgcaaaaccaagagccaagtattgtcatcaatggggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 ctaaagttcaggatgtctgatttgcaaaaccaagagccaagtattgtcatcaatggggat 651
Query: 361 cttaatgatgagccaatagatacatttgaggttgaagaagaggagcaagtttttgatgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 cttaatgatgagccaatagatacatttgaggttgaagaagaggagcaagtttttgatgaa 711
Query: 421 gtgaagcctaagaagactgtbactttcagtgggattgatgatgtggaagcggatgaagaa 480
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 712 gtgaagcctaagaagactgttactttcagtgggattgatgatgtggaagcggatgaagaa 771
Query: 481 cgtagaaagagagaatttgaagaaggtggtggtcttccagagcaaccaacgaacccagat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 cgtagaaagagagaatttgaagaaggtggtggtcttccagagcaaccaacgaacccagat 831
Query: 541 ttttccaagttgaaccctctatcaccagaaatyatcaatagacaagccactatcaatatt 600
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 832 ttttccaagttgaaccctctatcaccagaaattatcaatagacaagccactatcaatatt 891
Query: 601 ggtactatcggtcatgtcgctcacggtaaatctaccgttgtgagagccatttcaggtgtt 660
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 892 ggtactatcggtcatgtcgctcacggtaaatctaccgttgtgagagctatttcaggtgtt 951
Query: 661 caaaccgttcgtttcaaggatgaattagaacgtaatattaccattaaattaggttacgcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952 caaaccgttcgtttcaaggatgaattagaacgtaatattaccattaaattaggttacgcc 1011
Query: 721 aatgccaaaatctataaagcagaagatccagaatgcccagaaccagactgttataagtct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 aatgccaaaatctataaagcagaagatccagaatgcccagaaccagactgttataagtct 1071
Query: 781 ttcagatctgacaaagaagttgcaccaaaggttgatcttccaggttacagtggacgttat 840
||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 ttcagatctgacanagaaagtgcaccaaaggttgatcttccaggttacagtggacgttat 1131
Query: 841 aaactagtccgtcatgtttcctttgtcgattgtcctggtcacgatattttaatgtctacc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aaactagtccgtcatgtttcctttgtcgattgtcctggtcacgatattttaatgtctacc 1191
Query: 901 atgttgtctggtg 913
|||||||||||||
Sbjct: 1192 atgttgtctggtg 1204
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7456
Number of Sequences: 1807
Number of extensions: 7456
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 971
length of database: 10,358,551
effective HSP length: 16
effective length of query: 955
effective length of database: 10,329,639
effective search space: 9864805245
effective search space used: 9864805245
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)